STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FBV7Putative short chain dehydrogenase reductase family. (284 aa)    
Predicted Functional Partners:
A0A0G2HID1
Putative sorbitol dehydrogenase.
 
 
 
  0.797
A0A0G2FLI5
Putative alcohol dehydrogenaselike domain-containing protein.
 
 
 
  0.717
A0A0G2HGD3
Putative sorbitol dehydrogenase.
   
 
  0.717
A0A0G2FHV0
Putative malonylacyl carrier protein transacylase.
   
 0.582
A0A0G2FH36
Putative 3-oxoacyl; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.577
A0A0G2HWW2
Putative metallo-beta-lactamase family protein.
   
 0.567
A0A0G2FKR9
Putative sorbitol dehydrogenase.
 
 
 
  0.530
A0A0G2HU77
Clr5 domain-containing protein.
   
 
  0.530
A0A0G2IBK1
Clr5 domain-containing protein.
   
 
  0.530
A0A0G2G095
Putative polyketide synthase.
   
  0.512
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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