STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FCW7Putative aldo-keto reductase. (342 aa)    
Predicted Functional Partners:
A0A0G2I012
Uncharacterized protein.
    
  0.525
A0A0G2FHX4
Putative nuclear pore complex subunit nup133.
   
 0.486
A0A0G2IBU6
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.485
A0A0G2HVJ9
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.480
A0A0G2FB72
Putative pre-mrna-splicing factor 38b.
    
  0.473
A0A0G2HTJ7
Ribosomal protein L37; Binds to the 23S rRNA.
    
  0.473
A0A0G2HTL3
Putative 60s ribosomal protein l37.
    
  0.473
A0A0G2FPT3
Putative nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.
    
 0.466
A0A0G2HYV3
Putative zn 2cys6 transcription factor.
   
 
  0.407
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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