STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FE27Putative atp-dependent metallopeptidase. (729 aa)    
Predicted Functional Partners:
A0A0G2FIV9
Putative nadh:ubiquinone oxidoreductase 14kd subunit.
    
   0.929
A0A0G2FH45
Putative erythrocyte band 7 integral membrane protein.
   
 0.838
A0A0G2FBP2
Prohibitin.
   
 0.812
A0A0G2FFP2
Prohibitin.
   
 0.812
A0A0G2FCI8
Putative rhomboid protein mitochondrial.
   
 
 0.806
A0A0G2IC94
Putative atp-dependent clp protease.
 
 
  
 0.755
A0A0G2H2R8
Putative rhomboid protein 1.
   
 
 0.723
A0A0G2HF27
Putative mitochondrial metalloendopeptidase oma1.
   
 
 0.688
A0A0G2I0W0
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.686
A0A0G2G0Z3
Putative rna12 protein.
    
 
 0.683
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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