STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FFG9Putative alpha-l-rhamnosidase. (550 aa)    
Predicted Functional Partners:
A0A0G2FR89
Putative glycerophosphodiester phosphodiesterase gde1.
    
 0.829
A0A0G2FHL9
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.823
A0A0G2FJF8
Putative nadh-cytochrome b5 reductase.
    
  0.823
A0A0G2HF62
DRIM domain-containing protein.
   
  0.556
A0A0G2FV94
Putative ankyrin repeat protein nuc-2.
    
  0.551
A0A0G2F5L0
Putative u3 small nucleolar rna associated protein.
    
  0.514
A0A0G2F6B5
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.514
A0A0G2FDE2
Putative nucleolar complex protein 4.
    
  0.514
A0A0G2HVY2
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.514
A0A0G2HY84
Putative nucleolar essential protein 1.
    
  0.514
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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