STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FFS5D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (471 aa)    
Predicted Functional Partners:
A0A0G2HPL1
Putative phosphoserine aminotransferase.
 
 0.986
A0A0G2F5H4
Tryptophan synthase.
  
 0.945
A0A0G2F9P6
Putative l-lactate dehydrogenase; Belongs to the cytochrome b5 family.
    
 0.816
A0A0G2HGB8
Putative cytochrome b2; Belongs to the cytochrome b5 family.
    
 0.816
A0A0G2HUL6
Putative cytochrome b5-like protein.
    
 0.816
A0A0G2FRU0
Putative d-glycerate 3-kinase.
     
 0.811
A0A0G2HS12
Putativebisphosphoglycerate-independent phosphoglycerate mutase.
     
 0.805
A0A0G2FVB0
Putative phosphoglycerate mutase family protein.
    
 0.784
A0A0G2FVQ7
Putative alanine-glyoxylate aminotransferase.
  
 
 0.765
A0A0G2F9V2
Putative phosphoserine phosphatase.
  
 0.762
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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