STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FG76Putative vacuolar protein sorting-associated protein vps4; Belongs to the AAA ATPase family. (437 aa)    
Predicted Functional Partners:
A0A0G2FAL6
Uncharacterized protein.
   
 0.997
A0A0G2FIY7
Putative vacuolar-sorting protein snf7.
    
 0.995
A0A0G2IEH5
Putative snf7 family protein.
    
 0.995
A0A0G2FIB2
Putative class e vacuolar-protein sorting and endocytosis factor.
    
 0.993
A0A0G2F8F5
Putative snf7 family protein.
   
 0.991
A0A0G2FTQ3
Putative charged multivesicular body protein 3.
   
 0.965
A0A0G2FB96
Putative snf7 family protein.
   
 0.944
A0A0G2IB13
Putative vacuolar protein-sorting protein bro1.
   
 0.895
A0A0G2I6G3
Putative snf7 family protein.
   
 0.893
A0A0G2HLL0
Putative magnesium-dependent phosphatase.
    
 0.877
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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