STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FGQ7Putative nuclear pore complex protein an-nup82. (902 aa)    
Predicted Functional Partners:
A0A0G2FNT3
Putative nucleoporin sonb.
    
  0.938
A0A0G2FW42
Putative nuclear pore complex protein.
  
 
   0.900
A0A0G2HUG6
Putative nuclear pore complex subunit nup159.
  
 
   0.876
A0A0G2F4F5
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
 
      0.857
A0A0G2FC55
Uncharacterized protein.
    
  0.679
A0A0G2FIR8
Uncharacterized protein.
    
  0.679
A0A0G2HQW0
Uncharacterized protein.
    
  0.679
A0A0G2FYG8
Nup188_C domain-containing protein.
  
  
  0.626
A0A0G2FPT3
Putative nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.
     
 0.539
A0A0G2HVQ0
Putative iq calmodulin-binding domain-containing protein.
  
  
  0.482
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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