STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FGR7Putative ribosome biosis protein kri1. (646 aa)    
Predicted Functional Partners:
A0A0G2FSB7
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.992
A0A0G2FHD1
Putative ribonuclease mrp protein subunit rmp1.
   
 0.981
A0A0G2FZI3
Putative popld domain-containing protein.
   
  0.981
A0A0G2F6D7
Putative rnase p subunit p30.
   
  0.978
A0A0G2HR97
Ribonuclease P protein subunit.
   
  0.977
A0A0G2FBE7
Putative rpp14 family protein.
   
 0.975
A0A0G2FGI8
Uncharacterized protein.
   
  0.974
A0A0G2FQM2
Putative rnase p rpr2 rpp21 snm1 subunit domain-containing protein.
   
  0.950
A0A0G2IA35
Putative rrna maturation protein.
   
 
 0.929
A0A0G2FUA5
Putative small nucleolar ribonucleoprotein complex subunit utp14.
   
 
 0.923
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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