STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FJD8Putative gtpase activating protein. (920 aa)    
Predicted Functional Partners:
A0A0G2FBG6
Putative ras-2 protein.
    
 0.819
A0A0G2FKR4
Putative ras small monomeric gtpase.
    
 0.819
A0A0G2FRT6
Putative ras-like protein.
    
 0.819
A0A0G2HT62
Putative ras small monomeric gtpase.
    
 0.819
A0A0G2IFQ2
Putative c2 domain-containing protein.
    
 0.819
A0A0G2H959
Putative traf-type zinc finger.
    
 0.802
A0A0G2HQ22
Putative ras gtpase activator.
    
0.775
A0A0G2FGB6
Uncharacterized protein.
  
 
 0.695
A0A0G2F6X9
Putative gtp-binding protein rho4.
    
 0.682
A0A0G2FEP9
Putative ras family gtp-binding protein rho1p.
    
 0.682
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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