STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FJH6Putative importin 13. (228 aa)    
Predicted Functional Partners:
A0A0G2FA19
Putative superkiller protein.
    
 0.841
A0A0G2FX28
Putative pol ii transcription elongation factor subunit.
    
 0.810
A0A0G2FFN7
Putative rna polymerase ii-like protein.
    
 0.758
A0A0G2F954
Putative tetratricopeptide repeat protein 1.
    
 0.757
A0A0G2HE45
Putative elongation factor tu gtp binding domain-containing protein.
    
 0.713
A0A0G2FBK3
Putative dna damage-binding protein 1.
    
 0.692
A0A0G2F631
Putative ubiquitin ligase subunit; Belongs to the cullin family.
    
  0.672
A0A0G2FDF5
Putative atp-dependent rna helicase dob1.
    
 0.668
A0A0G2H390
Uncharacterized protein.
    
 0.667
A0A0G2HXF6
Putative rna polymerase iipaf1.
    
 0.667
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.