STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FK60Putative exosome complex exonuclease rrp. (802 aa)    
Predicted Functional Partners:
A0A0G2F9Z8
Putative cytosolic regulator pianissimo.
   
 0.977
A0A0G2FN13
Putative wd repeat-containing protein mip1.
   
 0.977
A0A0G2FDD2
Putative wd-repeat protein pop3.
    
 0.976
A0A0G2HNR6
Putative response regulator-like protein.
    
 0.976
A0A0G2HXH8
Putative gtp-binding protein gtr1.
    
 0.971
A0A0G2HXE3
Putative stress-activated map kinase-interacting protein.
    
 0.967
A0A0G2FZ56
Putative gtp-binding protein gtr2.
    
 0.966
A0A0G2HG71
Putative telomere length regulation protein.
    
 0.965
A0A0G2FQ46
Putative heat repeat protein.
   
 0.961
A0A0G2FH69
Putative ulk ulk protein kinase.
    
 0.960
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.