STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FKE5Putative uroporphyrinogen decarboxylase. (339 aa)    
Predicted Functional Partners:
A0A0G2FDW9
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.991
A0A0G2HPM9
Putative porphobilinogen deaminase.
 0.974
A0A0G2ICZ7
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.966
A0A0G2H825
Putative porphobilinogen deaminase.
 
 0.950
A0A0G2ICN7
Putative coproporphyrinogen iii oxidase.
  
 0.933
A0A0G2FQX1
Putative uroporphyrinogen-iii synthase.
  
 
 0.916
A0A0G2HNV0
Putative siroheme synthase.
    
 0.908
A0A0G2HTG8
Putative glutamate synthase.
    
 0.899
A0A0G2FBJ2
Putative biotin synthase.
  
 
 0.828
A0A0G2I8A9
Putative wyosine base formation.
    
  0.811
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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