STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FKK8Putative 60s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family. (390 aa)    
Predicted Functional Partners:
A0A0G2F591
Putative 60s ribosomal protein l21.
   
 0.999
A0A0G2F6G7
Putative 60s ribosomal protein l31.
   
 0.999
A0A0G2F738
Putative 60s ribosomal protein l17; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
A0A0G2F8H6
Putative 60s ribosomal protein l35.
  
 0.999
A0A0G2F9X5
Putative 40s ribosomal protein s20.
  
 
 0.999
A0A0G2FBB3
Putative 60s ribosomal protein l32.
  
 0.999
A0A0G2FBF7
Putative 40s ribosomal protein s16; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
A0A0G2FD88
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
A0A0G2FFM6
Putative 40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.
 
 
 0.999
A0A0G2FG00
Putative 60s ribosomal protein l23; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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