STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FKL8Putative dash complex subunit duo1. (231 aa)    
Predicted Functional Partners:
A0A0G2I0X2
Putative ribosomal protein.
   
 
 0.914
A0A0G2FQL9
Putative mitochondrial 54s ribosomal protein 6.
   
 
 0.900
A0A0G2HNX7
Putative upf0132 domain-containing protein.
 
      0.899
A0A0G2F6K6
Uncharacterized protein.
   
  0.898
A0A0G2FVW7
Putative dash complex subunit dad3.
    
 0.893
A0A0G2FU79
Putative 60s ribosomal protein l3.
   
 
 0.890
A0A0G2HTR3
Putative mitochondrial 54s ribosomal protein 23; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.885
A0A0G2I6K5
Putative 54s ribosomal protein l17.
   
   0.879
A0A0G2F6N5
Uncharacterized protein.
   
 
 0.874
A0A0G2I0L4
Putative 37s ribosomal protein s18.
   
   0.872
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.