STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FKN3Putative pre-mrna splicing factor. (183 aa)    
Predicted Functional Partners:
A0A0G2FTZ9
Putative cmgc srpk protein kinase.
    
 0.971
A0A0G2H7R9
Putative serine-threonine protein kinase.
    
 0.971
A0A0G2FTC8
Putative mrna export factor mex67.
   
 0.967
A0A0G2FFJ6
Nuclear cap-binding protein subunit 2.
    
 0.962
A0A0G2G045
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.962
A0A0G2HR55
Putative transformer-sr ribonucleoprotein.
   
 0.955
A0A0G2FJE0
Putative pre-mrna-splicing factor cef-1.
    
 
 0.946
A0A0G2FZI4
Putative cap binding protein.
    
 0.940
A0A0G2IED5
Putative exportin 1-like protein.
    
 
 0.937
A0A0G2FKS3
Putative rna-binding protein rbm25.
   
 
 0.936
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.