STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FLT2Putative wd repeat protein. (641 aa)    
Predicted Functional Partners:
A0A0G2FBK3
Putative dna damage-binding protein 1.
    
 0.969
A0A0G2F631
Putative ubiquitin ligase subunit; Belongs to the cullin family.
    
 0.930
A0A0G2FJD6
Putative cop9 signalosome subunit 6.
    
  0.865
A0A0G2FRD5
Putative cop9 signalosome complex subunit 2.
    
 0.832
A0A0G2FE60
Putative cop9 signalosome complex subunit 3.
    
  0.831
A0A0G2F4V7
Putative cop9 signalosome complex subunit 7a.
    
  0.800
A0A0G2IF79
Putative ring-box protein 1.
    
 0.765
A0A0G2IFU7
Putative swd1-like protein.
    
 0.761
A0A0G2HUM1
Putative cop9 signalosome complex subunit 4.
    
  0.756
A0A0G2F9Y7
Putative cop9 signalosome complex subunit 5.
    
  0.754
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.