STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FNV8Putative l-galactonate dehydratase. (453 aa)    
Predicted Functional Partners:
A0A0G2FR76
Putative d-galacturonic acid reductase.
     
 0.870
A0A0G2FHL4
Putative dyp-type peroxidase family protein.
    
 0.859
A0A0G2FJJ0
Putative ankyrin repeat-containing protein.
    
 0.837
A0A0G2FRQ6
Putative dihydrodipicolinate synthase; Belongs to the DapA family.
     
 0.831
A0A0G2FTS9
Putative paf acetylhydrolase family protein.
    
 0.830
A0A0G2F9J2
Putative ankyrin-like protein.
    
 0.761
A0A0G2HHF8
Putative ankyrin-like protein.
    
 0.761
A0A0G2F679
Putative sh3 domain-containing protein.
    
 
 0.755
A0A0G2FJ66
Putative actin lateral binding protein.
   
 0.743
A0A0G2FCZ2
Putative bzip transcription factor.
   
 0.702
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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