STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FQX5Putative integral membrane protein. (363 aa)    
Predicted Functional Partners:
A0A0G2FE62
Putative nmda receptor-regulated protein 1.
   
 
 0.784
A0A0G2F9J3
Putative n-terminal acetyltransferase a complex catalytic subunit ard1.
   
 
 0.746
A0A0G2FAA4
Putative saga complex component.
   
 0.720
A0A0G2IFU3
Putative histone acetyltransferase subunit 3.
    
 0.670
A0A0G2FJE0
Putative pre-mrna-splicing factor cef-1.
    
   0.568
A0A0G2HW31
Putative negative cofactor 2 complex subunit beta.
    
 0.553
A0A0G2FIP4
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.508
A0A0G2FW15
J domain-containing protein.
    
 0.478
A0A0G2H5I5
J domain-containing protein.
    
 0.478
A0A0G2FYT0
Putative 60s ribosomal protein l23a.
   
   0.438
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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