STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FS30Putative dna mismatch repair. (282 aa)    
Predicted Functional Partners:
A0A0G2FSA0
Putative dna mismatch repair protein.
  
 
0.988
A0A0G2H736
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.975
A0A0G2FF24
Putative dna mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.969
A0A0G2FQX8
Putative domain v.
 
 0.942
A0A0G2HW93
Putative dna mismatch repair protein.
 
 0.941
A0A0G2F508
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.936
A0A0G2I208
Putative msh5 protein.
 
 0.920
A0A0G2FGX2
Putative exonuclease 1.
   
 0.904
A0A0G2G0X2
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.871
A0A0G2FCV3
Putative dna mismatch repair protein pms1.
  
0.807
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.