STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FUT5Putative 50s ribosomal protein 27. (107 aa)    
Predicted Functional Partners:
A0A0G2FMC0
Putative mitochondrial 54s ribosomal protein 8; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.996
A0A0G2FXE9
Putative ribosomal protein l23.
   
 
 0.995
A0A0G2H6W3
Putative 37s ribosomal protein s12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.994
A0A0G2HTR3
Putative mitochondrial 54s ribosomal protein 23; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.994
A0A0G2FJA7
Putative ribosomal protein l4-like protein.
   
 
 0.991
A0A0G2IEH9
Putative mitochondrial 54s ribosomal protein 9.
   
  0.991
A0A0G2F6K6
Uncharacterized protein.
   
 0.990
A0A0G2FPQ3
Putative mitochondrial 54s ribosomal protein 19.
   
 0.990
A0A0G2HDI8
Putative mitochondrial 37s ribosomal protein mrps16.
   
   0.990
A0A0G2HPQ3
Putative mitochondrial 54s ribosomal protein l51.
   
 
 0.990
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.