STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FVZ2Putative pre-mrna-splicing factor cwc21. (189 aa)    
Predicted Functional Partners:
A0A0G2HJ00
Putative pre-mrna-processing factor 17.
    
 0.995
A0A0G2FJE0
Putative pre-mrna-splicing factor cef-1.
   
 
 0.991
A0A0G2FU90
Putative 116 kDa u5 small nuclear ribonucleoprotein component.
    
 
 0.990
A0A0G2H6D3
Putative pre-mrna processing splicing factor 8.
   
 
 0.990
A0A0G2FQW0
Putative sec63-domain-containing protein.
   
 
 0.989
A0A0G2HZX8
Putative cell cycle control protein cwf14.
    
 
 0.986
A0A0G2FJW0
Putative pre-mrna splicing factor cwc2.
    
 
 0.985
A0A0G2HC51
Putative cell cycle control protein.
    
 
 0.983
A0A0G2I7Z8
Putative cell cycle control protein.
    
 0.982
A0A0G2HP90
Putative pre-mrna-splicing factor cwc25.
   
 0.978
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.