STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FXE9Putative ribosomal protein l23. (175 aa)    
Predicted Functional Partners:
A0A0G2FMC0
Putative mitochondrial 54s ribosomal protein 8; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.996
A0A0G2HTR3
Putative mitochondrial 54s ribosomal protein 23; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.996
A0A0G2I0L4
Putative 37s ribosomal protein s18.
   
 
 0.996
A0A0G2FUT5
Putative 50s ribosomal protein 27.
   
 
 0.995
A0A0G2IG57
Putative ribosomal protein l19.
   
 
 0.995
A0A0G2FJA7
Putative ribosomal protein l4-like protein.
   
 
 0.994
A0A0G2HC63
Putative 50s ribosomal protein; Belongs to the universal ribosomal protein uL30 family.
   
   0.993
A0A0G2HDI8
Putative mitochondrial 37s ribosomal protein mrps16.
   
 
 0.992
A0A0G2I6K5
Putative 54s ribosomal protein l17.
   
 
 0.992
A0A0G2H759
Putative mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.991
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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