STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FZ68Putative tata-binding protein-associated factor mot1. (1859 aa)    
Predicted Functional Partners:
A0A0G2HED8
Putative tata-box-binding protein.
    
 
 0.990
A0A0G2FFJ1
Putative dna polymerase epsilon subunit c.
    
 
 0.933
A0A0G2HW31
Putative negative cofactor 2 complex subunit beta.
    
 
 0.909
A0A0G2IG44
Putative hsp90 co-chaperone cdc37.
 
      0.872
A0A0G2FUB7
Putative spt3-like protein.
    
 
 0.685
A0A0G2IF88
Putative amp-binding domain protein.
 
      0.681
A0A0G2FHM9
Putative chromatin remodelling complex atpase chain isw1.
  
  
0.670
A0A0G2FD79
Putative transcription initiation factor tfiid 127kd subunit.
   
  
 0.658
A0A0G2F5W9
Putative transcription initiation factor iib.
    
 
 0.652
A0A0G2FUK1
Putative phd finger domain protein.
   
 
 0.630
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.