STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2H5J5Putative secreted serine protease. (454 aa)    
Predicted Functional Partners:
A0A0G2G0G5
Putative myroilysin.
    
 0.482
A0A0G2F912
RING-type domain-containing protein.
    
  0.434
A0A0G2FHF8
RING-type domain-containing protein.
    
  0.434
A0A0G2FMD9
Uncharacterized protein.
    
  0.434
A0A0G2FZG8
Putative cell cycle checkpoint protein.
    
  0.434
A0A0G2H2D2
Putative ring finger domain-containing protein.
    
  0.434
A0A0G2H5W5
Putative ring-7 protein.
    
  0.434
A0A0G2H8I5
RING-type domain-containing protein.
    
  0.434
A0A0G2I644
Putative ring-8 protein.
    
  0.434
A0A0G2IF38
Putative SWIM zinc finger protein.
    
  0.434
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.