STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HBR1Putative peptidoglycan-binding lysin subgroup. (308 aa)    
Predicted Functional Partners:
A0A0G2FR40
Putative wd repeat-containing protein.
   
  0.516
A0A0G2FXZ6
Putative pre-rrna-processing protein ipi1.
    
 0.507
A0A0G2FJJ0
Putative ankyrin repeat-containing protein.
    
 0.501
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.501
A0A0G2IEY5
Putative mitochondrial 54s ribosomal protein rml2.
    
 0.490
A0A0G2FZ72
Putative alphasarcomeric (F-actin cross linking protein).
    
  0.468
A0A0G2FPX2
Putative nucleolar gtp-binding protein 2.
   
  0.454
A0A0G2HQZ6
Putative mhyt domain signaling.
    
  0.452
A0A0G2FGX4
Putative 40s ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family.
    
  0.451
A0A0G2FH71
Putative 60s ribosomal protein l2.
    
  0.437
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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