STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HD17Putative ring-6 protein. (230 aa)    
Predicted Functional Partners:
A0A0G2FCR2
Putative mitotic checkpoint protein bub3.
   
 
 0.954
A0A0G2FM69
Putative u2 snrnp component prp10.
   
    0.613
A0A0G2H4G1
Putative splicing factor 3a subunit 2.
   
 
 0.570
A0A0G2HYQ1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
 
      0.566
A0A0G2IF30
Putative 40s ribosomal protein s17.
 
      0.547
A0A0G2FPI1
WD_REPEATS_REGION domain-containing protein.
   
 
 0.542
A0A0G2HTN0
Uncharacterized protein.
   
 
 0.517
A0A0G2F7K5
Putative rna-binding domain-containing protein.
   
   0.446
A0A0G2FRK5
Putative bub protein kinase.
    
 
 0.444
A0A0G2IA67
Putative checkpoint protein kinase.
    
 
 0.444
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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