STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HE95Putative nuclear pore protein. (339 aa)    
Predicted Functional Partners:
A0A0G2FH56
Uncharacterized protein.
 
      0.788
A0A0G2FC75
Putative cbs domain containing protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.
   
 0.649
A0A0G2FQI8
Putative nuclear protein snf4.
   
 0.649
A0A0G2FN13
Putative wd repeat-containing protein mip1.
    
 0.646
A0A0G2FH69
Putative ulk ulk protein kinase.
    
 0.623
A0A0G2FNU3
Putative cell division control protein.
    
 0.605
A0A0G2FRU1
Putative calmodulin.
    
 0.605
A0A0G2FQE1
Putative mitochondrial ribosomal protein subunit s4.
   
 0.593
A0A0G2FK93
Putative acetylcarboxylase.
    
 0.588
A0A0G2H6J9
Putative conidiophore development protein hyma.
    
 0.582
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.