STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HKD3Uncharacterized protein. (275 aa)    
Predicted Functional Partners:
A0A0G2FN87
Putative exosome complex exonuclease rrp45.
   
 0.945
A0A0G2HQ56
Putative exosomal core protein csl4.
   
 0.945
A0A0G2HTG1
Putative rrna processing protein.
   
 0.944
A0A0G2FHE7
Putative exosome complex exonuclease rrp43.
   
 0.943
A0A0G2HRW8
Putative exosome complex exonuclease rrp40.
   
 0.941
A0A0G2FHX9
Putative exosome complex exonuclease rrp4.
    
 0.940
A0A0G2HPL5
Putative exosome complex subunit rrp46.
    
 0.940
A0A0G2HE45
Putative elongation factor tu gtp binding domain-containing protein.
   
 0.936
A0A0G2FDF5
Putative atp-dependent rna helicase dob1.
   
 0.915
A0A0G2FHK6
Putative atp-dependent rna helicase suv3.
   
 
 0.891
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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