STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HLC4Putative ibr domain protein. (233 aa)    
Predicted Functional Partners:
A0A0G2FFJ5
RBR-type E3 ubiquitin transferase.
    
 0.606
A0A0G2FI46
RBR-type E3 ubiquitin transferase.
    
 0.606
A0A0G2FKV4
Uncharacterized protein.
    
 0.606
A0A0G2FGA0
Putative ubiquitin-40s ribosomal protein s31 fusion protein.
    
  0.586
A0A0G2HJF0
Putative cia30 family protein.
    
  0.586
A0A0G2FMD4
Putative an1-type zinc finger protein.
   
  0.572
A0A0G2FTN3
Ubiquitin-like domain-containing protein.
   
  0.572
A0A0G2HVI3
Putative ubiquitin.
   
  0.572
A0A0G2FYI0
Putative kelch domain-containing protein.
    
  0.563
A0A0G2F969
Putative an1-type zinc finger protein.
    
  0.551
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.