STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HMV2Peptide hydrolase; Belongs to the peptidase M28 family. (1017 aa)    
Predicted Functional Partners:
A0A0G2F5P4
Putative scf e3 ubiquitin ligase complex f-box protein grra.
 
      0.899
A0A0G2FPM0
Putative branchpoint-bridging protein.
 
      0.758
A0A0G2IGH5
Putative branchpoint-bridging protein.
 
      0.483
A0A0G2ICX6
Putative atpase family aaa domain-containing protein 1; Belongs to the AAA ATPase family.
     
 0.439
A0A0G2H2I4
Putative uba domain-containing protein.
    
 0.432
A0A0G2FDU0
Putative ric1-domain-containing protein.
      
 0.428
A0A0G2IF16
Putative rho gtpase activator rga.
    
 0.400
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.