STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HQU5Putative peptidyl-prolyl cis-trans isomerase e. (155 aa)    
Predicted Functional Partners:
A0A0G2H9M4
Putative pre-mrna splicing factor syf1.
   
 0.998
A0A0G2HC51
Putative cell cycle control protein.
    
 0.998
A0A0G2FYD7
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
 0.989
A0A0G2HWD5
Putative pre-mrna splicing factor clf1.
   
 0.988
A0A0G2HZX8
Putative cell cycle control protein cwf14.
   
 0.986
A0A0G2FQG5
Putative pre-mrna-processing protein 45.
   
 0.985
A0A0G2F8E9
Putative pre-mrna splicing factor slt11.
   
 0.984
A0A0G2FPA9
Putative pre-mrna-splicing factor isy1.
   
  0.981
A0A0G2IFB0
Putative zinc finger protein 830-like protein.
    
 0.969
A0A0G2I6L5
Putative pre-mrna splicing factor syf2.
    
 0.950
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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