STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HRM5Putative ankyrin repeat protein. (649 aa)    
Predicted Functional Partners:
A0A0G2FR89
Putative glycerophosphodiester phosphodiesterase gde1.
    
 0.704
A0A0G2FV94
Putative ankyrin repeat protein nuc-2.
    
 0.574
A0A0G2IF16
Putative rho gtpase activator rga.
    
 0.572
A0A0G2HWN5
Serine/threonine-protein phosphatase.
    
  0.531
A0A0G2IG36
Putative 40s ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
    
  0.505
A0A0G2HG60
Putative amidase-like protein.
    
  0.493
A0A0G2FEF6
Putative nedd8-like protein.
    
  0.492
A0A0G2HYJ4
Putative myosin myo2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.492
A0A0G2FTH0
Putative signal transducer.
    
 0.485
A0A0G2H3Y4
Putative transcriptional elongation regulator (Elongin c); Belongs to the SKP1 family.
    
  0.485
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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