STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HTA1Putative rna-binding protein. (989 aa)    
Predicted Functional Partners:
A0A0G2FH92
Putative caf1 family ribonuclease.
    
 
 0.751
A0A0G2FF26
Putative atp-dependent rna helicase dhh1; Belongs to the DEAD box helicase family.
    
 
 0.677
A0A0G2FC29
Putative glucose-repressible alcohol dehydrogenase transcriptional effector.
    
 
 0.664
A0A0G2HAP2
Putative arm repeat-containing protein.
    
 
 0.664
A0A0G2FFM9
Putative rho-type gtpase-activating protein 1.
    
 
 0.602
A0A0G2FK01
Putative cell wall biosis protein phosphatase ssd1.
   
   0.590
A0A0G2HWD5
Putative pre-mrna splicing factor clf1.
    
  0.564
A0A0G2F8E9
Putative pre-mrna splicing factor slt11.
     
 0.551
A0A0G2I8G4
Putative mitotic control protein dis3; Belongs to the RNR ribonuclease family.
   
   0.517
A0A0G2FQG5
Putative pre-mrna-processing protein 45.
    
  0.499
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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