STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HXE7Putative u3 small nucleolar rna-associated protein 10. (1542 aa)    
Predicted Functional Partners:
A0A0G2FD87
Putative u3 small nucleolar rna-associated protein 15.
   
 0.999
A0A0G2FJF2
Putative utp21-domain-containing protein.
   
 0.999
A0A0G2FL92
Putative sporulation protein.
   
 0.999
A0A0G2FPW2
Putative gtp binding protein bms1.
   
 0.999
A0A0G2FRA1
Putative nucleolar protein nop-58.
   
 0.999
A0A0G2G036
Putative rrna biosis protein rrp5.
   
 0.999
A0A0G2H319
Putative wd40 repeat-like protein.
   
 0.999
A0A0G2H748
Putative small nucleolar ribonucleoprotein complex component.
   
 0.999
A0A0G2HF62
DRIM domain-containing protein.
   
 0.999
A0A0G2HP45
Putative u3 small nucleolar rna-associated protein.
   
 0.999
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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