STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2HXM2Putative pxa domain-containing protein. (448 aa)    
Predicted Functional Partners:
A0A0G2FEY1
Putative pxa domain-containing protein.
 
      0.899
A0A0G2HBX7
Putative mrna processing protein.
 
      0.899
A0A0G2HVB9
Putative sorting nexin-3.
     
 0.577
A0A0G2H6Z2
Putative rint-1 family protein.
   
 
  0.515
A0A0G2FGH1
Putative snare ykt6; Belongs to the synaptobrevin family.
     
 0.514
A0A0G2FD96
Putative vesicle transport v-snare protein.
     
 0.513
A0A0G2FDD7
Putative snare domain-containing protein.
    
 0.492
A0A0G2FJ62
Putative syntaxin 6.
    
 0.492
A0A0G2FMA3
Putative snare domain-containing protein.
     
 0.474
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
 
 0.469
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.