STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2IGQ7Putative pwi domain mrna processing. (117 aa)    
Predicted Functional Partners:
A0A0G2FE31
Putative nonsense-mediated mrna decay protein.
    
 0.988
A0A0G2FVZ2
Putative pre-mrna-splicing factor cwc21.
   
 0.973
A0A0G2FKS3
Putative rna-binding protein rbm25.
   
 0.958
A0A0G2HJ00
Putative pre-mrna-processing factor 17.
    
 0.950
A0A0G2FWA7
Putative nonsense-mediated mrna decay factor.
    
 
 0.948
A0A0G2HWZ1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
  
 0.948
A0A0G2I7Z8
Putative cell cycle control protein.
    
 0.945
A0A0G2FXV3
Putative peptidyl-prolyl cis-trans isomerase-like 2.
 
  
 0.921
A0A0G2FTC8
Putative mrna export factor mex67.
    
 0.915
A0A0G2FM69
Putative u2 snrnp component prp10.
   
 
 0.914
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.