Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANU14096.1 | ANU14097.1 | BBI08_09600 | BBI08_09605 | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| ANU14096.1 | ANU14099.1 | BBI08_09600 | BBI08_09615 | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | 0.836 |
| ANU14096.1 | luxS | BBI08_09600 | BBI08_09610 | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.961 |
| ANU14097.1 | ANU14096.1 | BBI08_09605 | BBI08_09600 | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| ANU14097.1 | ANU14099.1 | BBI08_09605 | BBI08_09615 | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | 0.972 |
| ANU14097.1 | luxS | BBI08_09605 | BBI08_09610 | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.984 |
| ANU14099.1 | ANU14096.1 | BBI08_09615 | BBI08_09600 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.836 |
| ANU14099.1 | ANU14097.1 | BBI08_09615 | BBI08_09605 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.972 |
| ANU14099.1 | ANU15569.1 | BBI08_09615 | BBI08_16340 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | 5'-methylthioadenosine nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| ANU14099.1 | luxS | BBI08_09615 | BBI08_09610 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.887 |
| ANU14099.1 | metK | BBI08_09615 | BBI08_01720 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.916 |
| ANU14099.1 | mtnN | BBI08_09615 | BBI08_02950 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.915 |
| ANU14099.1 | rpsD | BBI08_09615 | BBI08_02095 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.844 |
| ANU14099.1 | rpsG | BBI08_09615 | BBI08_13095 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.813 |
| ANU14099.1 | rpsJ | BBI08_09615 | BBI08_13155 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.815 |
| ANU14099.1 | speH | BBI08_09615 | BBI08_02330 | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.903 |
| ANU15569.1 | ANU14099.1 | BBI08_16340 | BBI08_09615 | 5'-methylthioadenosine nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Could be a S-adenosyl-L-methionine-dependent methyltransferase. | 0.915 |
| ANU15569.1 | luxS | BBI08_16340 | BBI08_09610 | 5'-methylthioadenosine nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.961 |
| ANU15569.1 | mtnN | BBI08_16340 | BBI08_02950 | 5'-methylthioadenosine nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.925 |
| luxS | ANU14096.1 | BBI08_09610 | BBI08_09600 | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.961 |
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