STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU14409.1Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa)    
Predicted Functional Partners:
ANU14408.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.742
ANU14581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.602
ANU15458.1
Heat-shock protein HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.594
ANU13381.1
Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.551
ANU13382.1
Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.551
ANU14410.1
NADPH-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.475
sbcD
Exonuclease sbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
   0.412
ANU15289.1
NADPH--cytochrome reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.412
ANU12473.1
DNA repair exonuclease YhaO; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.410
ANU15454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.410
Your Current Organism:
Planococcus halocryophilus
NCBI taxonomy Id: 1215089
Other names: DSM 24743, JCM 17719, P. halocryophilus, Planococcus halocryophilus Mykytczuk et al. 2012, strain Or1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.