STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU15202.1TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)    
Predicted Functional Partners:
ANU14287.1
Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
   
    0.715
ANU14158.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.706
ANU15201.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.581
ANU13244.1
Sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.531
ANU14946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.525
ANU15082.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.518
ANU12443.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.514
ANU14329.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.514
ANU12463.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.476
ANU14501.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.476
Your Current Organism:
Planococcus halocryophilus
NCBI taxonomy Id: 1215089
Other names: DSM 24743, JCM 17719, P. halocryophilus, Planococcus halocryophilus Mykytczuk et al. 2012, strain Or1
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