Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000730585_01597 | GCA_000730585_02427 | GCA_000730585_01597 | GCA_000730585_02427 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.534 |
GCA_000730585_01597 | GCA_000730585_04227 | GCA_000730585_01597 | GCA_000730585_04227 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.722 |
GCA_000730585_01597 | GCA_000730585_04433 | GCA_000730585_01597 | GCA_000730585_04433 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.545 |
GCA_000730585_01597 | GCA_000730585_05215 | GCA_000730585_01597 | GCA_000730585_05215 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.461 |
GCA_000730585_01597 | GCA_000730585_05492 | GCA_000730585_01597 | GCA_000730585_05492 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.810 |
GCA_000730585_01597 | GCA_000730585_05756 | GCA_000730585_01597 | GCA_000730585_05756 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.770 |
GCA_000730585_01597 | aroA | GCA_000730585_01597 | GCA_000730585_04432 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.535 |
GCA_000730585_02427 | GCA_000730585_01597 | GCA_000730585_02427 | GCA_000730585_01597 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.534 |
GCA_000730585_02427 | GCA_000730585_04098 | GCA_000730585_02427 | GCA_000730585_04098 | Unannotated protein. | Unannotated protein. | 0.462 |
GCA_000730585_02427 | GCA_000730585_04227 | GCA_000730585_02427 | GCA_000730585_04227 | Unannotated protein. | Unannotated protein. | 0.932 |
GCA_000730585_02427 | GCA_000730585_04889 | GCA_000730585_02427 | GCA_000730585_04889 | Unannotated protein. | Unannotated protein. | 0.777 |
GCA_000730585_02427 | GCA_000730585_05215 | GCA_000730585_02427 | GCA_000730585_05215 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000730585_02427 | GCA_000730585_05492 | GCA_000730585_02427 | GCA_000730585_05492 | Unannotated protein. | Unannotated protein. | 0.765 |
GCA_000730585_02427 | GCA_000730585_05603 | GCA_000730585_02427 | GCA_000730585_05603 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.832 |
GCA_000730585_02427 | GCA_000730585_05756 | GCA_000730585_02427 | GCA_000730585_05756 | Unannotated protein. | Unannotated protein. | 0.512 |
GCA_000730585_04098 | GCA_000730585_02427 | GCA_000730585_04098 | GCA_000730585_02427 | Unannotated protein. | Unannotated protein. | 0.462 |
GCA_000730585_04098 | GCA_000730585_04433 | GCA_000730585_04098 | GCA_000730585_04433 | Unannotated protein. | Unannotated protein. | 0.914 |
GCA_000730585_04098 | GCA_000730585_05215 | GCA_000730585_04098 | GCA_000730585_05215 | Unannotated protein. | Unannotated protein. | 0.891 |
GCA_000730585_04098 | GCA_000730585_05492 | GCA_000730585_04098 | GCA_000730585_05492 | Unannotated protein. | Unannotated protein. | 0.835 |
GCA_000730585_04098 | GCA_000730585_05603 | GCA_000730585_04098 | GCA_000730585_05603 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.529 |
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