STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA64186.1Hypothetical protein. (48 aa)    
Predicted Functional Partners:
AGA64187.1
Hypothetical protein.
       0.773
AGA64188.1
Sugar transporter protein; FIG097052.
       0.773
AGA64189.1
Hypothetical protein.
       0.741
AGA64190.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
       0.741
AGA64185.1
S-adenosyl-L-methionine dependent methyltransferase; Similar to cyclopropane-fatty-acyl-phospholipid synthase.
       0.697
AGA64183.1
Flavin-containing amine oxidase; COG2907.
       0.530
AGA64184.1
Hypothetical protein; FIG001571.
       0.530
Your Current Organism:
Liberibacter crescens
NCBI taxonomy Id: 1215343
Other names: L. crescens BT-1, Liberibacter crescens BT-1, Liberibacter sp. BT-1, bacterium BT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.