STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA64786.1Zinc ABC transporter, ATP-binding protein ZnuC. (269 aa)    
Predicted Functional Partners:
AGA64787.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
   0.993
AGA64788.1
Zinc ABC transporter, periplasmic-binding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.981
AGA65008.1
Manganese ABC transporter, inner membrane permease protein SitC.
 
   0.823
AGA65009.1
Manganese ABC transporter, inner membrane permease protein SitD.
 
   0.820
AGA65006.1
Manganese ABC transporter, periplasmic-binding protein SitA; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.671
Your Current Organism:
Liberibacter crescens
NCBI taxonomy Id: 1215343
Other names: L. crescens BT-1, Liberibacter crescens BT-1, Liberibacter sp. BT-1, bacterium BT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.