STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA65205.1Secretion protein HlyD family protein. (428 aa)    
Predicted Functional Partners:
AGA65204.1
Putative ABC transport protein, ATP-binding component.
 
 0.994
AGA64980.1
RND efflux system, outer membrane lipoprotein CmeC.
  
 
 0.871
AGA64557.1
Hypothetical protein.
  
  
 0.687
AGA65203.1
Hypothetical protein.
       0.588
AGA64083.1
Sensory box/GGDEF domain/EAL domain protein.
  
  
 0.493
AGA64115.1
Sensory Transduction Protein Kinase.
   
  
 0.489
secF
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.475
AGA65206.1
Hypothetical protein.
       0.463
AGA64110.1
General substrate transporter.
 
   0.438
AGA64286.1
L-Proline / Glycine betaine transporter ProP.
 
   0.423
Your Current Organism:
Liberibacter crescens
NCBI taxonomy Id: 1215343
Other names: L. crescens BT-1, Liberibacter crescens BT-1, Liberibacter sp. BT-1, bacterium BT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.