STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA65328.1Quinone oxidoreductase. (332 aa)    
Predicted Functional Partners:
AGA65005.1
Malonyl CoA-acyl carrier protein transacylase.
 
    
 0.905
AGA64100.1
3-oxoacyl-(acyl-carrier-protein) synthase, KASI; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
      0.900
AGA64965.1
3-oxoacyl-(acyl-carrier-protein) synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
      0.900
AGA65002.1
3-oxoacyl-(acyl-carrier-protein) synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
      0.900
AGA64820.1
NADP-dependent malic enzyme.
     
 0.592
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
      
 0.447
nadE
NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.431
AGA65317.1
8-amino-7-oxononanoate synthase.
  
 
 0.431
Your Current Organism:
Liberibacter crescens
NCBI taxonomy Id: 1215343
Other names: L. crescens BT-1, Liberibacter crescens BT-1, Liberibacter sp. BT-1, bacterium BT-1
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