STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK18924.1Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family. (242 aa)    
Predicted Functional Partners:
CCK18923.1
Galactosamine-6-phosphate isomerase.
 
  
 0.826
CCK19851.1
Transcriptional regulator, AraC family.
 
  
 0.596
CCK18926.1
PTS system, mannose-specific IIC component.
 
    0.594
CCK18928.1
Conserved hypothetical protein related to PTS system.
 
     0.572
CCK18925.1
PTS system, mannose-specific IID component.
 
    0.567
CCK18922.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.564
CCK19052.1
Maltose operon transcriptional repressor MalR,LacI family.
  
   
 0.554
CCK19831.1
Nicotinamide-nucleotide adenylyltransferase, NadR family / Ribosylnicotinamide kinase.
   
    0.536
CCK20678.1
Transcriptional regulator.
  
   
 0.532
CcpA
Catabolite control protein A.
  
   
 0.452
Your Current Organism:
Lactococcus raffinolactis 4877
NCBI taxonomy Id: 1215915
Other names: L. raffinolactis 4877, Lactococcus raffinolactis str. 4877, Lactococcus raffinolactis strain 4877
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.