STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK19833.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
CCK19544.1
Transposase and inactivated derivatives, IS5 family.
 
     0.779
CCK20691.1
Mobile element protein.
 
     0.779
CCK19394.1
Transposase and inactivated derivatives, IS5 family.
  
     0.774
CCK19598.1
Transposase and inactivated derivatives, IS5 family.
  
     0.774
CCK20221.1
Transposase and inactivated derivatives, IS5 family.
  
     0.774
CCK19909.1
Transposase and inactivated derivatives, IS5 family.
  
     0.773
CCK19834.1
Histidine kinase.
       0.422
Your Current Organism:
Lactococcus raffinolactis 4877
NCBI taxonomy Id: 1215915
Other names: L. raffinolactis 4877, Lactococcus raffinolactis str. 4877, Lactococcus raffinolactis strain 4877
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.