STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH72912.1Hypothetical protein. (501 aa)    
Predicted Functional Partners:
celC_1
Endoglucanase C precursor.
    
 0.944
celC_2
Endoglucanase C precursor.
    
 0.944
SHI27505.1
Thermophilic serine proteinase precursor.
  
 0.944
nprV_1
Neutral protease precursor; Extracellular zinc metalloprotease.
   
 0.877
nprV_2
Neutral protease precursor; Extracellular zinc metalloprotease.
   
 0.877
cirA
Colicin I receptor precursor.
    
 
 0.876
SHI12371.1
Hypothetical protein.
  
 0.874
ftsK
DNA translocase FtsK.
    
 
 0.871
prcA
Calcium-dependent protease precursor.
  
 0.827
SHI62160.1
Hypothetical protein.
    
 
 0.799
Your Current Organism:
Vibrio aerogenes
NCBI taxonomy Id: 1216006
Other names: V. aerogenes CECT 7868, Vibrio aerogenes ATCC 700797, Vibrio aerogenes CAIM 906, Vibrio aerogenes CCRC 17041, Vibrio aerogenes CECT 7868, Vibrio aerogenes FG1, Vibrio aerogenes LMG 19650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.