STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zraS_2Sensor protein ZraS. (533 aa)    
Predicted Functional Partners:
rpfC
Sensory/regulatory protein RpfC.
0.932
barA_3
Signal transduction histidine-protein kinase BarA.
 
0.929
arcB
Aerobic respiration control sensor protein ArcB.
0.927
barA_1
Signal transduction histidine-protein kinase BarA.
0.910
cheY_1
Chemotaxis protein CheY.
 
 
 0.904
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
0.899
luxN_1
Autoinducer 1 sensor kinase/phosphatase LuxN.
 
0.880
luxN_2
Autoinducer 1 sensor kinase/phosphatase LuxN.
 
0.880
phnD
Phosphate-import protein PhnD precursor.
 
  
  0.878
cheV_2
Chemotaxis protein CheV.
 
 0.847
Your Current Organism:
Vibrio aerogenes
NCBI taxonomy Id: 1216006
Other names: V. aerogenes CECT 7868, Vibrio aerogenes ATCC 700797, Vibrio aerogenes CAIM 906, Vibrio aerogenes CCRC 17041, Vibrio aerogenes CECT 7868, Vibrio aerogenes FG1, Vibrio aerogenes LMG 19650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.