Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHH58777.1 | ahpC | VA7868_00028 | VA7868_00453 | Hybrid peroxiredoxin hyPrx5. | Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.940 |
| SHH58777.1 | yraA | VA7868_00028 | VA7868_04447 | Hybrid peroxiredoxin hyPrx5. | Putative cysteine protease YraA. | 0.592 |
| SHI76046.1 | dagK | VA7868_04305 | VA7868_04245 | Putative FAD-linked oxidoreductase. | Diacylglycerol kinase. | 0.724 |
| SHI76046.1 | rpsS | VA7868_04305 | VA7868_01233 | Putative FAD-linked oxidoreductase. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.648 |
| SHI76046.1 | yraA | VA7868_04305 | VA7868_04447 | Putative FAD-linked oxidoreductase. | Putative cysteine protease YraA. | 0.738 |
| ahpC | SHH58777.1 | VA7868_00453 | VA7868_00028 | Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Hybrid peroxiredoxin hyPrx5. | 0.940 |
| ahpC | yraA | VA7868_00453 | VA7868_04447 | Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Putative cysteine protease YraA. | 0.557 |
| ce | yraA | VA7868_04448 | VA7868_04447 | Cellobiose 2-epimerase. | Putative cysteine protease YraA. | 0.947 |
| dagK | SHI76046.1 | VA7868_04245 | VA7868_04305 | Diacylglycerol kinase. | Putative FAD-linked oxidoreductase. | 0.724 |
| dagK | ohrB | VA7868_04245 | VA7868_02686 | Diacylglycerol kinase. | Organic hydroperoxide resistance protein OhrB. | 0.445 |
| dagK | rplE | VA7868_04245 | VA7868_01225 | Diacylglycerol kinase. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.490 |
| dagK | rplN | VA7868_04245 | VA7868_01227 | Diacylglycerol kinase. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.488 |
| dagK | yraA | VA7868_04245 | VA7868_04447 | Diacylglycerol kinase. | Putative cysteine protease YraA. | 0.590 |
| ohrB | dagK | VA7868_02686 | VA7868_04245 | Organic hydroperoxide resistance protein OhrB. | Diacylglycerol kinase. | 0.445 |
| ohrB | yraA | VA7868_02686 | VA7868_04447 | Organic hydroperoxide resistance protein OhrB. | Putative cysteine protease YraA. | 0.607 |
| rplE | dagK | VA7868_01225 | VA7868_04245 | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | Diacylglycerol kinase. | 0.490 |
| rplE | rplN | VA7868_01225 | VA7868_01227 | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| rplE | rpsJ | VA7868_01225 | VA7868_01238 | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
| rplE | rpsS | VA7868_01225 | VA7868_01233 | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
| rplE | yraA | VA7868_01225 | VA7868_04447 | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | Putative cysteine protease YraA. | 0.733 |
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