STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE86305.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
SCF49577.1
SCP-2 sterol transfer family protein.
  
     0.757
SCF38267.1
Hypothetical protein.
  
     0.730
SCF12392.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.727
SCE99053.1
Protein of unknown function (DUF2993).
  
     0.673
SCF23671.1
Protein of unknown function (DUF2795).
  
     0.627
SCF49241.1
Hypothetical protein.
  
     0.613
SCF32496.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.598
SCF19695.1
Hypothetical protein.
  
     0.577
SCE86288.1
Para-aminobenzoate synthetase component 1.
       0.575
SCF36359.1
Protein of unknown function (DUF4192).
  
     0.516
Your Current Organism:
Micromonospora matsumotoense
NCBI taxonomy Id: 121616
Other names: ATCC 49364, CIP 106812, Catellatispora matsumotoense, Catellatispora matsumotoensis, Catellatospora matsumotoense, Catellatospora matsumotoensis, DSM 44100, IFO 14550, IMSNU 22003, JCM 9104, M. matsumotoense, Micromonospora matsumotoensis, NBRC 14550, NRRL B-16490, VKM Ac-2009, strain 6393-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.